GoMap released Oct, 2013
Current
Alumni
Collaborators
Contacts
Christy Strong - Postdoctoral Fellow or Clinician
University of Nevada Las Vegas
christy.strong@unlv.edu
Office: WHI 119a Phone: (702)895-1271
Bio:
Christy is now a faculty member in the School of Life Sciences at UNLV
Projects:
HIVToolbox, GoMAP, HIV eradication with TALENs
Collaborative Papers:
Strong CL , Guerra HP , Mathew KR, Roy N, Simpson LR, and Schiller MR . (2015). Damaging the Integrated HIV Proviral DNA with TALENs. PLOS ONE, 10, e0125652. PMID: 25946221; Lyon K, Strong CL, Schooler S, Young R, Roy N, Ozar B, Bachmeier M, Rajasekaran S, Schiller M,. (2015). Natural variability of minimotifs in 1,092 people indicates that minimotifs are targets of evolution. Nucleic Acids Res., pii, gkv580. PMID: 26068475; Sargeant DP, Hedden MW, Deverasetty S, Strong CL, Alaniz IJ, Bartlett AB, Brandon NR, Brooks SB, Brown FA, Bufi F, Charkarova M, David RP, Dobritch KM, Guerra HP, Levit KS, Mathew KR, Matti R, Maza DQ, Mistry S, Novakovic N, Pomerantz A, Rafalski T, Rathna. (2014). The Geogenomic Mutational Atlas of Pathogens (GoMAP) Web System. PLoS ONE, 9, e92877. PMID: 24675726; Sargeant DP, Deverasetty S, Strong CL, Alaniz IJ, Bartlett A, Brandon NR, Brooks SB, Brown FA, Bufi F, Charkarova M, David RP, Dobritch KM, Guerra HP, Hedden MP, et al.. (2014). The HIVToobox 2 web system integrates sequence, structure, function and mutation analysis. PLoS One, 9, e98810. PMID: 24886930; Mi T, Merlin JC, Deverasetty S, Gryk MR, Bill TJ, Brooks AW, Lee LY, Rathnayake V, Ross CA, Sargeant DP, Strong CL, Watts P, Rajasekaran S, Schiller MR. (2012). Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences.. Nucleic Acids Res., 40 (Database issue), D252-60. PMID: 22146221;
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Omo Igbinedion - Graduate Student
omo_kind@yahoo.com
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Sandeep Deverasetty - Software Developer
UNLV Office: WHI 118
Projects:
HIVtoolbox
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Henrik Babajanyan - Undergraduate Bioinformatician
babajany@unlv.nevada.edu
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Steven Brooks - Undergraduate Experimentalist
Bio:
Annotations for C-terminome web-application, and wet-lab experiments
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Kausik Charkrabarti - Postdoctoral Fellow or Clinician
UConn Health Center
Projects:
Axonal Outgrowth
Collaborative Papers:
Schiller et al., 2005 Chakrabarti et al., 2005
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Shruti Patel - Undergraduate Bioinformatician
UNLV
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Brian Guerrero - Undergraduate Bioinformatician
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Michael Rogers - Software Developer
UNLV
MrMDRogers(@)gmail.com
Bio:
I am Software.
Projects:
Biotoolkit Website. Stem cell project.
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Ronald J Nowling - Summer Student
Eckardts College
Projects:
Minimotif Miner
Collaborative Papers:
Vyas et al., 2010
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Brandon Roe - Undergraduate Bioinformatician
UNLV
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Anike Zalyte Bill - Graduate Student
UNLV
anikezalyte@gmail.com
Office: WHI 118
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Astha Bajpai - Graduate Student
University of Nevada Las Vegas
asthabajpai@gmail.com
Office: WHI 118
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Horacio Guerra - Undergraduate Experimentalist
University of California, San Diego
guerrahv@yahoo.com
Bio:
Horacia received undergraduate fellowships from the NIH StepUp program, NIH Nevada INBRE, NSF EPSCOR program to support his work in the SchillerLAB. His work also led to a patent application for eradication of HIV with TALENs. He coauthored three papers while in the lab; and is first author on one paper. Horacio moved on to graduate school and UCSD (August, 2015)
Projects:
HIVToolbox, GoMAP, Erradication of HIV with TALENs
Collaborative Papers:
Strong CL , Guerra HP , Mathew KR, Roy N, Simpson LR, and Schiller MR . (2015). Damaging the Integrated HIV Proviral DNA with TALENs. PLOS ONE, 10, e0125652. PMID: 25946221 Sargeant DP, Hedden MW, Deverasetty S, Strong CL, Alaniz IJ, Bartlett AB, Brandon NR, Brooks SB, Brown FA, Bufi F, Charkarova M, David RP, Dobritch KM, Guerra HP, Levit KS, Mathew KR, Matti R, Maza DQ, Mistry S, Novakovic N, Pomerantz A, Rafalski T, Rathna. (2014). The Geogenomic Mutational Atlas of Pathogens (GoMAP) Web System. PLoS ONE, 9, e92877. PMID: 24675726 Sargeant DP, Deverasetty S, Strong CL, Alaniz IJ, Bartlett A, Brandon NR, Brooks SB, Brown FA, Bufi F, Charkarova M, David RP, Dobritch KM, Guerra HP, Hedden MP, et al.. (2014). The HIVToobox 2 web system integrates sequence, structure, function and mutation analysis. PLoS One, 9, e98810. PMID: 24886930
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Cole Niebuhr - Graduate Student
UNLV Office: WHI 118
Projects:
Chimeric Minimotif Decoys
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David Sargeant - Contractor
UNLV
chorpler@gmail.com
Office: WHI 118
Collaborative Papers:
Mi T, Merlin JC, Deverasetty S, Gryk MR, Bill TJ, Brooks AW, Lee LY, Rathnayake V, Ross CA, Sargeant DP, Strong CL, Watts P, Rajasekaran S, Schiller MR. (2012). Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences.. Nucleic Acids Res., 40 (Database issue), D252-60. PMID: 22146221 Sargeant D, Deverasetty S, Luo Y, Baleta AV, Zobrist S, Rathnayake V, Russo JC, Vyas J, Muesing MA, and Schiller MR. (2011). HIVToolbox, an integrated web application for investigating HIV. PLoS One, 6, e20122. PMID: 21647445 Jay Vyas, Ronald J.Nowling, Thomas Meusberger, David Sargeant, Krishna Kadaveru. Michael R. Gryk, Vamsi Kundeti Sanguthevar Rajasekaran and Martin R. Schiller. (2010). MimoSA: a system for minimotif annotation. BMC Bioinformatics, 11, 328. PMID: 19656955
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Rma Kumra - Lab Manager
UNLV
kumrar.unlv.nevada.edu
Office: WHI 118
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Purna Patel - Undergraduate Bioinformatician
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Krishna Kadaveru - Graduate Student
UConn Health Center
Projects:
Minimotif Miner
Collaborative Papers:
Kadaveru et al., 2008, Vyas et al., 2010
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Melissa Cope - Undergraduate Bioinformatician
Projects:
Stem Cell Bioinformatics
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Bruce Randall - Undergraduate Bioinformatician
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Marimar Romines - Undergraduate Bioinformatician
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Caroline Chang - Undergraduate Bioinformatician
UNLV
Projects:
MnM - peptide synthesis
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Henrymatthew Santos - Undergraduate Bioinformatician
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Oniel Toledo - Undergraduate Bioinformatician
toledooniel@gmail.com
Office: WHI 118
Bio:
C-terminome: Web-application developer
Projects:
C-Terminome
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Angel Villahoz-Baleta - Software Developer
UConn Health Center
Projects:
HIVtoolbox -software developer
Collaborative Papers:
Sargeant et al., 2011
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Marek Barwinski - Summer Student
UConn Health Center
Projects:
Minimotif Miner
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Teinisha Irvey - Undergraduate Bioinformatician
UNLV
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Viraj Rathnayake - Undergraduate Experimentalist
UNLV
rathnay3@unlv.nevada.edu
Office: WHI 119
Projects:
HIVtoolbox
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Roxanne David - Undergraduate Experimentalist
UNLV
davidr9@unlv.nevada.edu
Office: WHI118
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Darlene Lara - Undergraduate Bioinformatician
UNLV
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Deaudre LeCato - Undergraduate Experimentalist
lecatod2@gmail.com
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Thomas Meusberger - Software Developer
Zappos
Projects:
Minimotif Miner
Collaborative Papers:
Vyas et al., 2010
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Clara Liu - Undergraduate Experimentalist
UNLV
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Alex Spelman - Undergraduate Bioinformatician
UNLV
Projects:
HIV toolbox
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Nemanja Novakovic - Undergraduate Experimentalist
novakovicn3@gmail.com
Bio:
Annotations for C-terminome web-application, and wet-lab experiments
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Briana Sugihara - Summer Student
Projects:
Stem Cell Bioinformatics
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Stephanie Zobrist - Undergraduate Bioinformatician
UNLV
Bio:
Stephanie is an Art major and has created some software Icons and the artwork on the HIVToolbox website
Projects:
HIVtoolbox artwork for icons and websites
Collaborative Papers:
Sargeant et al., 2011
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Andy Brooks - Summer Student
RPI
brooka5@rpi.edu
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Michael Girmai - Lab Manager
UNLV
Girmaim@unlv.nevada.edu
Office: WHI 118
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Max Olsen - Summer Student
Utah State University
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Alexandria Bragg - Undergraduate Bioinformatician
UNLV
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Alex Navarro-Harrison - Summer Student
UNLV
navarr97@unlv.nevada.edu
Office: WHI119
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Narineh Abadian - Summer Student
Projects:
Stem Cell database
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Jaqueline Russo - Undergraduate Bioinformatician
UNLV
Projects:
HIVtoolbox
Collaborative Papers:
manuscript submitted
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Dorothea Maza - Undergraduate Bioinformatician
UNLV
Projects:
HIVtoolbox
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Travis Bill - Undergraduate Bioinformatician
University of Nevada Las Vegas
travisjbill@gmail.com
Office: WHi 118
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Logan Li - Summer Student
Meadows High School
Bio:
BioPod
Projects:
Minimotif Miner
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Steve Schooler - Software Developer
University of Nevada Las Vegas Office: WHI 118
Projects:
Minimotif Diversity
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Natalie Phan - Undergraduate Bioinformatician
UNLV
natphan88(at)gmail.com
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Emily Tamadonfar - Undergraduate Experimentalist
University of Nevada Las Vegas
tamadon2@unlv.nevada.edu
Office: WHI 118
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Sean Williams - Undergraduate Experimentalist
University of Nevada Las Vegas
titleist6973@hotmail.com
Office: WHI 118
Bio:
C-terminome: Experimentalist
Projects:
C-terminal motifs
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Robert Fundulea - Undergraduate Bioinformatician
University of Nevada Las Vegas
rifundulea@yahoo.com
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Nikki Cohen - Technician
UNLV
cohenn3@unlv.nevada.edu
Office: WHI 118
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Sean Tuggle - Undergraduate Bioinformatician
UNLV
tuggles@unlv.nevada.edu
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Steve Garcia - Undergraduate Bioinformatician
UNLV
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Kyle Martin - Undergraduate Experimentalist
UNLV
Projects:
Stem Cell informatics
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David Lacambacal - Undergraduate Bioinformatician
UNLV
Projects:
Minimotif Miner
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Sherrie Serrano - Undergraduate Bioinformatician
UNLV
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Jeff Grudinski - Undergraduate Bioinformatician
UNLV
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Michael Hedden - Undergraduate Bioinformatician
UNLV Office: WHI 118
Bio:
C-terminome: Web-application developer
Projects:
GoMAP, Minimotif Miner, C-terminome
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Derick Brown - Undergraduate Bioinformatician
UNLV
derickbrowny@yahoo.com
Office: WHI 118
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Elizabeth Kong - Undergraduate Bioinformatician
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Kareem Sanchez - Undergraduate Experimentalist
UNLV
sanchk2(at)unlv.nevada.edu
Office: WHI 118
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Nick Brandon - Undergraduate Experimentalist
UNLV
nick.brandon@hotmail.com
Office: WHI 118
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Izua Alaniz - Undergraduate Bioinformatician
UNLV
alanizl@unlv.nevada.edu
Office: WHI 118
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Ray Matti - Undergraduate Bioinformatician
Ray_matti112@hotmail.com
Office: WHI 118
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Sarah Songao - Undergraduate Bioinformatician
songaos@yahoo.com
Office: WHI 118
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Justin Limtong - Undergraduate Bioinformatician
justin.limtong@gmail.com
Office: WHI 118
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Sandy Yousif - Undergraduate Bioinformatician
Sandyyousif@hotmail.com
Office: WHI 118
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Karlyn Dobritch - Undergraduate Experimentalist
UNLV
karlyn.dobritch@gmail.com
Office: WHI 118
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Noura Rezapour - Undergraduate Bioinformatician
UNLV
noura.rezapour@gmail.com
Office: WHI118
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Austin Pomerantz - Undergraduate Bioinformatician
UNLV
pmtz1021@gmail.com
Office: WHI118
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David Foshee - Undergraduate Bioinformatician
UNLV
xtreme1002003@yahoo.com
Office: WHI 118
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Flaviona Bufi - Undergraduate Bioinformatician
UNLV
bufif@unlv.nevada.edu
Office: WHI 118
Bio:
C-terminome: Wet-lab experiments GoMAP & HIV Too lBox 2: Annotations
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Alexandria Bartlett - Undergraduate Bioinformatician
UNLV
bartlet3@unlv.nevada.edu
Office: WHI 118
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Prashant Singh - Postdoctoral Fellow or Clinician
UNLV Office: WHI 119
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Thao Hoang - Undergraduate Bioinformatician
UNLV
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Farah Chowdury - Undergraduate Bioinformatician
UNLV
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Nervik Roy - Undergraduate Bioinformatician
UNLV
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Dayne West - Software Developer
UNLV
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Luzanne Ermita - Undergraduate Bioinformatician
UNLV
lermita@gmail.com
Office: WHI 118
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Joseph Foti - Undergraduate Bioinformatician
UNLV
fotij@unlv.nevada.edu
Office: WHI 118
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Jared Kuntz - Undergraduate Bioinformatician
UNLV
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Willie Wang - Undergraduate Bioinformatician
UNLV
williew1129@gmail.com
Office: WHI 118
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Kiran Mathew - Undergraduate Experimentalist
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Kelvy Levit - Undergraduate Bioinformatician
UNLV
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Josue Portillo - Undergraduate Bioinformatician
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Carl Walsh - Summer Student
UNLV
carlfwalsh@gmail.com
Office: WHI 118
Bio:
Carl is a summer student visiting from Harvey Mudd College
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Patrick Gradie - Software Developer
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Lacy Simpson - Undergraduate Experimentalist
lacysimpson@gmail.com
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Nadia Hussain - Undergraduate Bioinformatician
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Dylan Harmon - Undergraduate Experimentalist
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Brittany Ozar - Undergraduate Bioinformatician
UNLV Office: WHI 118
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Jacqueline Trinidad - Undergraduate Bioinformatician
trinid15@unlv.nevada.edu
Projects:
Orominer
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Mark Bachmeier II - Undergraduate Bioinformatician
bachmei3@unlv.nevada.edu
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Caleb Albornoz - Undergraduate Bioinformatician
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Bryan Armendariz - Undergraduate Bioinformatician
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John John - Summer Student
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Ji Eun Bae - Summer Student
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Aaron Singer - Undergraduate Bioinformatician
singea1@unlv.nevada.edu
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Monika Chakarova - Undergraduate Bioinformatician
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Tim Rafalski - Undergraduate Bioinformatician
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Tushar Sharma - Undergraduate Bioinformatician
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Julio Hernandez - Undergraduate Bioinformatician
UNLV
maverickjh(at)gmail.com
Projects:
Origin of life research
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Tunchanok Wopech - Undergraduate Experimentalist
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Jackyln Newsome - Undergraduate Bioinformatician
Bio:
C-terminome: Primer design program & annotations for web-application.
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Scott Fireoved - Undergraduate Bioinformatician
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Josh Huebner - Undergraduate Bioinformatician
UNLV Office: WHI 118
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